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Meliponini neotropicais: o gênero Partamona Schwarz, 1939 (Hymenoptera, Apidae, Apinae) - bionomia e biogeografia Rev. Bras. entomol.
Camargo,João M. F.; Pedro,Silvia R. M..
This work, dedicated to the study of nesting habits of the species of the Neotropical genus Partamona Schwarz, is a sequence to the taxonomic revision recently published elsewhere. A total of 214 nests and nest aggregations of 18 species [Partamona epiphytophila Pedro & Camargo, 2003; P. testacea (Klug, 1807); P. mourei Camargo, 1980; P. vicina Camargo, 1980; P. auripennis Pedro & Camargo, 2003; P. combinata Pedro & Camargo, 2003; P. chapadicola Pedro & Camargo, 2003; P. nhambiquara Pedro & Camargo, 2003; P. ferreirai Pedro & Camargo, 2003; P. pearsoni (Schwarz, 1938); P. gregaria Pedro & Camargo, 2003; P. batesi Pedro & Camargo, 2003; P. ailyae Camargo, 1980; P. cupira (Smith, 1863); P....
Tipo: Info:eu-repo/semantics/article Palavras-chave: Biogeography; Meliponini; Nests; Partamona; Phylogeny.
Ano: 2003 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0085-56262003000300001
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Micromorphology in Mycale taxonomy (Mycalidae, Poecilosclerida, Demospongiae), with the description of two new micracanthoxea-bearing species Naturalis
Carballo, José Luis; Hajdu, Eduardo.
Two new species of Mycale with micracanthoxeas are described: Mycale (Aegogropila) lilianae n. sp., mainly characterized by the presence of toxas as large as 300 µm, and Mycale (Carmia) urizae n. sp., the first Mycale with micracanthoxeas described from Africa, characterized by the presence of anisochelae-III with the falx projecting downwards from the middle basal portion of the frontal alae of the head, and by the presence of two morphologically distinct size classes of toxas, with toxas-II being notably oxea-shaped. A discussion of all species of Mycale with micracanthoxeas is included. It is postulated that a comprehensive assessment of the distribution of this character, as well as of other micromorphological features of Mycale spicules, may shed...
Tipo: Article / Letter to the editor Palavras-chave: Poecilosclerida; Mycalidae; Mycale; Taxonomy; Micromorphology; Phylogeny; Microscleres; Scanning electron microscopy.
Ano: 1998 URL: http://www.repository.naturalis.nl/record/534412
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Mise à jour de la nomenclature des démosponges de Tunisie OceanDocs
Ben Mustapha, K.; Chaouch, M.; Dhahbi, L..
التطورات السريعة للتأريخ العرقي للإسفنج ، كذاك الأعمال الحديثة التي أحدثت في البلاد التونسية في علم التصنيف و علم البيئة لهذه المجموعة قد شجعتنا لإعادة النظر في التسميات. هذا التجديد مكننا أيضا اعتبار الإضافات و التسجيلات الأخيرة.
Tipo: Journal Contribution Palavras-chave: Porifera; Ecology; Phylogeny; Sponges; Taxonomy; Terminology; Taxonomy; Terminology; Ecology; Phylogeny; Sponges; Http://aims.fao.org/aos/agrovoc/c_7631; Http://aims.fao.org/aos/agrovoc/c_24907; Http://aims.fao.org/aos/agrovoc/c_2467; Http://aims.fao.org/aos/agrovoc/c_13325; Http://aims.fao.org/aos/agrovoc/c_7321.
Ano: 2007 URL: http://hdl.handle.net/1834/4283
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Mitochondrial and morphological differentiation in a previously unrecognized radiation of the land snail genus Parachloritis Ehrmann, 1912 on Timor (Pulmonata: Camaenidae) Naturalis
Köhler, F.; Kessner, V..
The present work revises the taxonomy of one group of camaenid gastropods from Timor-Leste based on the study of a large number of recently collected ethanol preserved samples as well as historic museum material, including types. By employing comparative analyses of the variation in morphological features (shell, penial anatomy) and the differentiation in mitochondrial DNA sequences of the cytochrome c oxidase subunit 1 gene (COI) and the 16S rDNA (16S), altogether nineteen species are recognized from Timor-Leste and adjacent areas in the Lesser Sunda and Moluccas, such as West-Timor, Adonara, Leti and Sermata Islands (Indonesia). Four of these species were described previously and have mostly been placed within the genus Chloritis Beck, 1837 in the few...
Tipo: Article / Letter to the editor Palavras-chave: Gastropoda; Helicoidea; New species; Phylogeny; Systematics; Taxonomy; 42.73; 42.64.
Ano: 2014 URL: http://www.repository.naturalis.nl/record/471852
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Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed Genet. Mol. Biol.
Cothran,E. Gus; Juras,Rytis; Macijauskiene,Vale.
Genetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared...
Tipo: Info:eu-repo/semantics/article Palavras-chave: D-loop; Equus caballus; Phylogeny; Polymorphism.
Ano: 2005 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006
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Molecular analyses reveal the occurrence of three new sympatric lineages of velvet worms (Onychophora: Peripatidae) in the eastern Amazon basin Genet. Mol. Biol.
Cunha,Williana T. R.; Santos,Rita C. O.; Araripe,Juliana; Sampaio,Iracilda; Schneider,Horacio; Rêgo,Péricles S..
Abstract In the present study, we investigated the possible existence of new lineages of peripatids through comparisons between known Neotropical species and specimens obtained from two locations in Pará, a state in eastern Brazilian Amazonia using a molecular approach based on sequences of the mtDNA genes COI, 16Sr RNA, and 18S RNA. The analyses included also sequences of Asian and African taxa for a more systematic understanding of the phylogenetic relationships within the group. The analysis of the COI, 16S rRNA and 18S RNA sequences permitted the identification of three distinct lineages (A, B and C) based on two different phylogenetic approaches (Bayesian methods and ML). The three lineages presented here are completely distinct from all other...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Amazonia; New lineages; Peripatidae; Phylogeny; Onychophora.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000100147
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Molecular analysis of the N gene of canine distemper virus in dogs in Brazil Arq. Bras. Med. Vet. Zootec.
Castilho,J.G.; Brandão,P.E.; Carnieli Jr,P.; Oliveira,R.N.; Macedo,C.I.; Peixoto,Z.M.P.; Carrieri,M.L.; Kotait,I..
Eleven central-nervous-system samples collected from stray dogs between 2000 and 2004 were found positive by RT-PCR, which amplified a 480bp fragment of the N gene of canine distemper virus (CDV). Phylogenetic analysis based on partial N-gene sequences showed four major clusters. All dog strains segregated into cluster I, with a mean nucleotide identity of 95.8% and 95.6% with the Onderstepoort and Lederle vaccine strains, respectively. Cluster II contained all the raccoon-related strains, cluster III Orient strains and Cluster IV the Onderstepoort and Lederle vaccine strains, with a mean nucleotide identity of 99.7% between them. This is the first report of phylogenetic analysis of CDV strains in Brazil.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Dog; Canine distemper virus; RT-PCR; Phylogeny.
Ano: 2007 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352007000300016
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Molecular and phenotypic characterisation of novel Phaeoacremonium species isolated from esca diseased grapevines Naturalis
Essakhi, S.; Mugnai, L.; Crous, P.W.; Groenewald, J.Z.; Surico, G..
Petri disease and esca are very destructive grapevine decline diseases that occur in most countries where grapevine (Vitis vinifera) is cultivated. Phaeoacremonium species are among the principal hyphomycetes associated with symptoms of the two diseases, producing a range of enzymes and phytotoxic metabolites. The present study compared the phylogeny of a global collection of 118 Phaeoacremonium isolates from grapevines, in order to gain a better understanding of their involvement in Petri disease and esca. Phylogenetic analyses of combined DNA sequence datasets of actin and β-tubulin genes revealed the presence of 13 species of Phaeoacremonium solated from esca diseased grapevines. Phaeoacremonium aleophilum was the most frequently isolated species with...
Tipo: Article / Letter to the editor Palavras-chave: Actin; Β-tubulin; Esca; Morphology; Phaeoacremonium; Phylogeny.
Ano: 2008 URL: http://www.repository.naturalis.nl/record/532098
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Molecular and phylogenetic analysis of mitochondrial control region in Robertsonian karyomorphs of Graomys griseoflavus (Rodentia, Sigmodontinae) Mastozool. neotrop.
Catanesi,Cecilia I.; Vidal-Rioja,Lidia; Zambelli,Andrés.
The South American rodent Graomys griseoflavus is a species with a Robertsonian (Rb) autosomal polymorphism. A marked genetic differentiation between 2n=42-41 and 2n=38-34 karyomorphic groups was evidenced by cytogenetic and molecular analysis. The mitochondrial control region was sequenced in all Graomys karyomorphs for its characterization and used to trace more accurate phylogenetic relationships. The molecular organization showed to be coincident with the consensus molecular structure described for other rodent taxa, exhibiting the conserved domains ETAS (extended termination-associated sequences), CD (central domain) and CSB (conserved sequence block) 1, 2 and 3. Phylogenetic trees showed that 2n=42-41 and 2n=38-34 karyomorphic groups form separate...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Rodentia; Graomys; Robertsonian polymorphism; MtDNA; Phylogeny.
Ano: 2006 URL: http://www.scielo.org.ar/scielo.php?script=sci_arttext&pid=S0327-93832006000100003
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Molecular characterization of 'Candidatus Liberibacter' species/strains causing huanglongbing disease of citrus in Kenya Electron. J. Biotechnol.
Magomere,Titus O; Obukosia,Silas D; Mutitu,Eunice; Ngichabe,Christopher; Olubayo,Florence; Shibairo,Solomon.
This study was undertaken to characterize the alpha subgroup of the proteobacteria causing the huanglongbing (HLB) disease of citrus from three different ecological zones of Kenya namely the Lower highlands (LH2, LH3, 1800-1900 m above sea level); Upper midlands (UM3, UM4, 1390-1475m), Lower midlands (LM5, LM4, LM3 of 1290-1340-1390m), by isolation and sequencing DNA encoding the L10 and L12 ribosomal proteins and the intergenic region. A 7I6-basepair DNA fragment was amplified and sequenced and consisted of 536 basepairs of DNA encoding the L10 protein, 44 basepairs of DNA intergenic region and 136 basepairs of DNA that partially encodes the L12 protein. Sequences of rpL10/L12 protein genes from Kenyan strains were 98% and 81% similar to the South African...
Tipo: Journal article Palavras-chave: Citrus greening disease; DNA sequencing; Intergenic regions; Phylogeny; Ribosomal protein genes.
Ano: 2009 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582009000200005
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Molecular characterization of Indian pathotypes of Puccinia striiformis f. sp. tritici and multigene phylogenetic analysis to establish inter- and intraspecific relationships Genet. Mol. Biol.
Aggarwal,Rashmi; Kulshreshtha,Deepika; Sharma,Sapna; Singh,Vaibhav K.; Manjunatha,Channappa; Bhardwaj,Subhash C.; Saharan,Mahender S..
Abstract Stripe rust caused by Puccinia striiformis f. sp. tritici (Pst) is one of the most devastating diseases of wheat (Triticum spp.) worldwide. Indian isolates were characterised based on their phenotypic reaction on differential hosts carrying different Yr genes. Based on virulence/avirulence structure, isolates were characterised into ten different pathotypes viz. 70S0-2, 67S64, 70S4, 66S0, 70S64, 66S64-1, 38S102, 47S102, 46S119, and 78S84. These Indian pathotypes of P. striiformis f. sp. tritici and 38 pathotypes of other rust species (P. graminis tritici and P. triticina) were used in this study to analyze their molecular phylogenetic relationship. The nucleotides of rDNA-ITS, partial β-tubulin and ketopantoate reductase genes of all the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Wheat; Stripe rust; Virulence; Diversity; Phylogeny.
Ano: 2018 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000500834
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Molecular characterization of MHC-DRB cDNA in water buffalo (Bubalus bubalis) Genet. Mol. Biol.
Naskar,Soumen; Deb,Sitangsu M.; Niranjan,Saket K.; Kumar,Subodh; Sharma,Deepak; Sakaram,Durgam; Sharma,Arjava.
In the present study, water buffalo MHC (Bubu)-DRB cDNA was cloned and characterized. The 1022 base long-amplified cDNA product encompassed a single open reading frame of 801 bases that coded for 266 amino acids. The Bubu-DRB sequence showed maximum homology with the BoLA-DRB3*0101 allele of cattle. A total of seven amino acid residues were found to be unique for the Bubu-DRB sequence. The majority of amino acid substitutions was observed in the β1 domain. Residues associated with important functions were mostly conserved. Water buffalo DRB was phylogenetically closer to goat DRB*A.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Water buffalo; CDNA; DRB; MHC; Phylogeny.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000100013
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Molecular detection and phylogenetic relationship of wild-type strains of canine distemper virus in symptomatic dogs from Uberlândia, Minas Gerais Arq. Bras. Med. Vet. Zootec.
Headley,S.A.; Santos,T.R.; Bodnar,L.; Saut,J.P.E.; Silva,A.P.; Alfieri,A.F.; Medeiros,A.A.; Soares,N.P.; Alfieri,A.A..
This study investigated the occurrence of canine distemper virus (CDV) by evaluating the presence of viral RNA within urine samples of dogs from Uberlândia, MG, with clinical manifestations suggestive of infection by CDV by targeting the CDV N gene. Of the clinical samples collected ( n =33), CDV viruria was detected in 45.5%. Five dogs died spontaneously; all had characteristic CDV-associated histopathological alterations and demonstrated CDV viruria. Statistical analyses revealed that the age, gender, breed, or the organ system of the dog affected had no influence on the occurrence of canine distemper. Myoclonus and motor incoordination were the most significant neurological manifestations observed. A direct association was observed between...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Canine distemper; Viruria; Phylogeny; Epidemiology.
Ano: 2015 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352015000601510
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Molecular diagnosis of Hepatozoon canis in symptomatic dogs in the city of Goiania, Goiás, Brazil Arq. Bras. Med. Vet. Zootec.
Duarte,S.C.; Parente,J.A.; Silveira Neto,O.J.; Jayme,V.S.; Bastos,T.S.A.; Linhares,G.F.C..
ABSTRACT More than 300 species have been described in the genus Hepatozoon, occurring in different vertebrates. Among these, only Hepatozoon canis and Hepatozoon americanum are seen in dogs. Different methods may be used for laboratory diagnosis. The most common of these is direct parasitological examination of parasite stages in blood smears. The aim of this investigation was to conduct a phylogenetic study on Hepatozoon isolates from symptomatic dogs in the city of Goiânia, Goiás, Brazil. Blood samples were obtained from 40 symptomatic dogs that had been referred to the Veterinary Hospital of the Federal University of Goiás. Among these, only two samples were positive for Hepatozoon spp. using the direct parasitological method. These samples were then...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Canis familiaris; Hepatozoonosis; Molecular epidemiology; Phylogeny.
Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352016000601431
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Molecular evidence of polyphyletism in the plant genus Carum L. (Apiaceae) Genet. Mol. Biol.
Papini,Alessio; Banci,Francesca; Nardi,Enio.
An analysis of internal transcribed spacer (ITS) DNA sequences of the four species of Carum L. (Apiaceae) known in Italy revealed that this genus is polyphyletic. Maximum parsimony with bootstrap resampling, maximum likelihood and Bayesian inference analyses resulted in three distinct clades: Carum carvi L. clustered within tribe Careae Baill. (former Aegopodium clade); Hellenocarum multiflorum (= Carum multiflorum), Carum heldreichii and Carum appuanum clustered within the tribe Pyramidoptereae Boiss.; and H. multiflorum and C. heldreichii formed a well supported clade. Since the sister group of H. multiflorum and C. heldreichii was Bunium elegans the autonomy of Hellenocarum from Carum is confirmed by our study. We also found that C. appuanum clustered...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Apiaceae; Carum; Hellenocarum; ITS; Phylogeny.
Ano: 2007 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000300029
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Molecular identification of the occurrence of magnetotactic bacteria in fresh water sediments (Czech Republic) BJM
Rulík,Martin; Chaudhary,Prem Prashant.
Magnetotactic bacteria (MTB) are of considerable interest because of their importance in the manufacture of various bioinspired materials. In order to find out the status of magnetotactic bacteria at three different sediment in Czech Republic, samples collected from both standing and running freshwaters were subjected to molecular diversity analysis by using 16S rRNA gene approach. Total community DNA from sediment sample was isolated and used for PCR, cloning and sequence analysis. Of the 24 analyzed sequences, six clones are closely related to Magnetobacterium sp. affiliated with the Nitrospira phylum which showed the dominance of Magnetobacterium phylotypes in the sample. This study will provide useful insight about the community structure of MTB in...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Magnetotactic bacteria; Sediment; PCR; Cloning; Phylogeny; 16S rRNA gene.
Ano: 2014 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822014000400016
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Molecular phylogenetic analyses reveal a close evolutionary relationship between Podosphaera (Erysiphales: Erysiphaceae) and its rosaceous hosts Naturalis
Takamatsu, S.; Niinomi, S.; Harada, M.; Havrylenko, M..
Podosphaera is a genus of the powdery mildew fungi belonging to the tribe Cystotheceae of the Erysiphaceae. Among the host plants of Podosphaera, 86 % of hosts of the section Podosphaera and 57 % hosts of the subsection Sphaerotheca belong to the Rosaceae. In order to reconstruct the phylogeny of Podosphaera and to determine evolutionary relationships between Podosphaera and its host plants, we used 152 ITS sequences and 69 28S rDNA sequences of Podosphaera for phylogenetic analyses. As a result, Podosphaera was divided into two large clades: clade 1, consisting of the section Podosphaera on Prunus (P. tridactyla s.l.) and subsection Magnicellulatae; and clade 2, composed of the remaining member of section Podosphaera and subsection Sphaerotheca. Because...
Tipo: Article / Letter to the editor Palavras-chave: 28S rDNA; Evolution; ITS; Molecular clock; Phylogeny; Powdery mildew fungi; Rosaceae.
Ano: 2010 URL: http://www.repository.naturalis.nl/record/532391
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Molecular phylogeny and phylogeography of the Cuban cave-fishes of the genus Lucifuga: Evidence for cryptic allopatric diversity OceanDocs
García-Machado, E.; Hernández, D.; García-Debrás, A.; Chevalier-Monteagudo, P.; Metcalfe, C.; Bernatchez, L.; Casane, D..
Underground environments are increasingly recognized as reservoirs of faunal diversity. Extreme environmental conditions and limited dispersal ability of underground organisms have been acknowledged as important factors promoting divergence between species and conspecific populations. However, in many instances, there is no correlation between genetic divergence and morphological differentiation. Lucifuga Poey is a stygobiotic fish genus that lives in Cuban and Bahamian caves. In Cuba, it offers a unique opportunity to study the influence of habitat fragmentation on the genetic divergence of stygobiotic species and populations. The genus includes four species and one morphological variant that have contrasting geographical distributions. In this study, we...
Tipo: Journal Contribution Palavras-chave: Fish; Phylogeny.
Ano: 2011 URL: http://hdl.handle.net/1834/4138
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Molecular phylogeny of advanced snakes (Serpentes, Caenophidia) with an emphasis on South American Xenodontines: a revised classification and descriptions of new taxa Pap. Avulsos de Zool. (São Paulo)
Zaher,Hussam; Grazziotin,Felipe Gobbi; Cadle,John E.; Murphy,Robert W.; Moura-Leite,Julio Cesar de; Bonatto,Sandro L..
We present a molecular phylogenetic analysis of caenophidian (advanced) snakes using sequences from two mitochondrial genes (12S and 16S rRNA) and one nuclear (c-mos) gene (1681 total base pairs), and with 131 terminal taxa sampled from throughout all major caenophidian lineages but focussing on Neotropical xenodontines. Direct optimization parsimony analysis resulted in a well-resolved phylogenetic tree, which corroborates some clades identified in previous analyses and suggests new hypotheses for the composition and relationships of others. The major salient points of our analysis are: (1) placement of Acrochordus, Xenodermatids, and Pareatids as successive outgroups to all remaining caenophidians (including viperids, elapids, atractaspidids, and all...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Serpentes; Colubridae; Caenophidia; Phylogeny; Classification; Systematics; Xenodontinae; Dipsadinae; New genus; Elapoidea; Colubroidea; South America; West Indies.
Ano: 2009 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0031-10492009001100001
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Molecular phylogeny of the genus Saguinus (Platyrrhini, Primates) based on the ND1 mitochondrial gene and implications for conservation Genet. Mol. Biol.
Tagliaro,Claudia Helena; Schneider,Horacio; Sampaio,Iracilda; Schneider,Maria Paula Cruz; Vallinoto,Marcelo; Stanhope,Michael.
The systematics of the subfamily Callitrichinae (Platyrrhini, Primates), a group of small monkeys from South America and Panama, remains an area of considerable discussion despite many investigations, there being continuing controversy over subgeneric taxonomic classifications based on morphological characters. The purpose of our research was to help elucidate the phylogenetic relationships within the monkey genus Saguinus (Callitrichinae) using a molecular approach to discover whether or not the two different sections containing hairy-faced and bare-faced species are monophyletic, whether Saguinus midas midas and Saguinus bicolor are more closely related than are S. midas midas and Saguinus midas niger, and if Saguinus fuscicollis melanoleucus and...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Saguinus; Callitrichinae; ND1; Phylogeny; MtDNA; Conservation.
Ano: 2005 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000100009
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